MRIQC: individual T1w report

Summary

  • BIDS filename: sub-6002_ses-2_T1w.
  • Date and time: 2022-12-08, 05:56.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5490213576156827
cnr2.4655842654624793
efc0.5551698164058473
fber960.7219932031611
fwhmavg4.216376666666666
fwhmx4.11046
fwhmy4.79645
fwhmz3.74222
icvscsf0.21389395731918442
icvsgm0.41428231738271026
icvswm0.3718237252981053
inumed1.808448314666748
inurange0.8356812596321106
qi10.0
qi20.0038325846847961824
rpvecsf28.04949721928485
rpvegm14.811655505405415
rpvewm19.38520091362829
sizex176
sizey256
sizez256
snrcsf3.4033074367193246
snrgm10.388683828161316
snrtotal11.030592033718497
snrwm19.299784836274846
snrdcsf29.946612753857636
snrdgm60.48723185648555
snrdtotal56.16257587824341
snrdwm78.05388302438705
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk4.228641431203382
summarybgmad8.394165268582812
summarybgmean18.77967508867309
summarybgmedian16.985335305333138
summarybgn3008351.0
summarybgp056.4043067544698715
summarybgp9535.54854328930378
summarybgstdv9.123384433316723
summarycsfk0.13653956941876055
summarycsfmad115.59178402638626
summarycsfmean399.53866262956456
summarycsfmedian383.7015090286732
summarycsfn25554.0
summarycsfp05242.6211283504963
summarycsfp95601.4479386806488
summarycsfstdv112.74150467718707
summarygmk-0.01928027288960177
summarygmmad75.13465961715107
summarygmmean776.0736379299426
summarygmmedian775.0139333307743
summarygmn19192.0
summarygmp05654.7243455946445
summarygmp95899.108978703618
summarygmstdv74.59980059258962
summarywmk0.7258632847900315
summarywmmad48.43846187772377
summarywmmean998.7643238817493
summarywmmedian1000.0928301364183
summarywmn189349.0
summarywmp05911.6391440927982
summarywmp951080.4715207070112
summarywmstdv51.81872221609009
tpmoverlapcsf0.12028326094150543
tpmoverlapgm0.4076394736766815
tpmoverlapwm0.46195778250694275
wm2max0.2995732367247756
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime11:53:42.897500
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[0.117425, 0.992085, 0.0444802, 0.0273724, 0.0415397, -0.998762]
ImageOrientationTextSag>Cor(6.8)>Tra(-1.3)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NonlinearGradientCorrectionTrue
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0401949
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber24
ShimSetting[2596, 5519, -7528, -136, 172, -615, 194, -314]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp267.574
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sumb86bfcb3db45e9c3ab2444fbc6757c86
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.